[Agage-sc] [EXTERNAL] Re: AGAGE69 freeze reminder and gccompare-nc improvements

Wed May 1 17:08:14 PDT 2024

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Dear all,

Those of you that do the data review, please keep in mind that data freeze for AGAGE 69 will be May 6.

Please add any new data issues to the shared google document to which you all have access.

The following sites are included: LJ, ZEP, MHD, TAC, TOB, JFJ, CMN, THD, GS, RPB, SMO, AS (Aspendale), CG

Time has essentially run out to discuss any calibration related issues with Chris in time for the freeze.

Best regards,

Jens

From: Jens Mühle <jmuhle at ucsd.edu><mailto:jmuhle at ucsd.edu>
To: Agage-Station-Support at sio.ucsd.edu<mailto:Agage-Station-Support at sio.ucsd.edu> <agage-station-support at sio.ucsd.edu><mailto:agage-station-support at sio.ucsd.edu>, Agage Sc <agage-sc at espo.nasa.gov><mailto:agage-sc at espo.nasa.gov>, Alistair Manning <alistair.manning at metoffice.gov.uk><mailto:alistair.manning at metoffice.gov.uk>, Luke Western <luke.western at bristol.ac.uk><mailto:luke.western at bristol.ac.uk>
Sent: Friday, 26/4/2024 16:25 PDT -0700
Subject: Re: AGAGE69 freeze reminder and gccompare-nc improvements

Dear all,

Those of you that do the data review, please keep in mind that data freeze for AGAGE 69 will be May 6.

Best regards,

Jens
From: Peter Salameh <psalameh at gcwerks.com><mailto:psalameh at gcwerks.com>
To: Stefan Reimann <Stefan.Reimann at empa.ch><mailto:Stefan.Reimann at empa.ch>, Jens Mühle <jmuhle at ucsd.edu><mailto:jmuhle at ucsd.edu>, Peter Salameh <psalameh at gcwerks.com><mailto:psalameh at gcwerks.com>, Jgor.arduini at uniurb.it<mailto:Jgor.arduini at uniurb.it> <jgor.arduini at uniurb.it><mailto:jgor.arduini at uniurb.it>, Ronald G Prinn <rprinn at mit.edu><mailto:rprinn at mit.edu>, Jooil Kim <jjkim at ucsd.edu><mailto:jjkim at ucsd.edu>, Peter Simmonds <PETERGSIMMONDS at aol.com><mailto:PETERGSIMMONDS at aol.com>, Paul B. Krummel <Paul.Krummel at csiro.au><mailto:Paul.Krummel at csiro.au>, Ray Wang <raywang at eas.gatech.edu><mailto:raywang at eas.gatech.edu>, Gerry Spain <gerard.spain at nuigalway.ie><mailto:gerard.spain at nuigalway.ie>, Alistair Manning <alistair.manning at metoffice.gov.uk><mailto:alistair.manning at metoffice.gov.uk>, Joe Pitt <joseph.pitt at bristol.ac.uk><mailto:joseph.pitt at bristol.ac.uk>, 박선영 <sparky at knu.ac.kr><mailto:sparky at knu.ac.kr>, Paul Steele <Paul.Steele at csiro.au><mailto:Paul.Steele at csiro.au>, Schlauri, Paul <Paul.Schlauri at empa.ch><mailto:Paul.Schlauri at empa.ch>, Vollmer, Martin <Martin.Vollmer at empa.ch><mailto:Martin.Vollmer at empa.ch>, Chris Lunder <Chris.Lunder at nilu.no><mailto:Chris.Lunder at nilu.no>, Simon O'doherty <S.ODoherty at bristol.ac.uk><mailto:S.ODoherty at bristol.ac.uk>, Roland Schmidt <roschmidt at ucsd.edu><mailto:roschmidt at ucsd.edu>, Hyeri Park <parkhyeri4848 at gmail.com><mailto:parkhyeri4848 at gmail.com>, Dickon Young <Dickon.Young at bristol.ac.uk><mailto:Dickon.Young at bristol.ac.uk>, Michela Maione <michela.maione at uniurb.it><mailto:michela.maione at uniurb.it>, Rust, Dominique <dominique.rust at empa.ch><mailto:dominique.rust at empa.ch>, Andreas Engel <an.engel at iau.uni-frankfurt.de><mailto:an.engel at iau.uni-frankfurt.de>, Bo Yao <yaobo at fudan.edu.cn><mailto:yaobo at fudan.edu.cn>, Ove Hermansen <oh at nilu.no><mailto:oh at nilu.no>, Blagoj Mitrevski <Blagoj.Mitrevski at csiro.au><mailto:Blagoj.Mitrevski at csiro.au>, Chris Harth <charth at ucsd.edu><mailto:charth at ucsd.edu>, Anita Ganesan <anita.ganesan at bristol.ac.uk><mailto:anita.ganesan at bristol.ac.uk>, Ray F. Weiss <rfweiss at ucsd.edu><mailto:rfweiss at ucsd.edu>, Matt Rigby <Matt.Rigby at bristol.ac.uk><mailto:Matt.Rigby at bristol.ac.uk>, Luke Western <luke.western at bristol.ac.uk><mailto:luke.western at bristol.ac.uk>, Kieran Stanley <k.m.stanley at bristol.ac.uk><mailto:k.m.stanley at bristol.ac.uk>, Thomas Wagenhäuser <wagenhaeuser at iau.uni-frankfurt.de><mailto:wagenhaeuser at iau.uni-frankfurt.de>, Paul J. Fraser <Paul.Fraser at csiro.au><mailto:Paul.Fraser at csiro.au>, Stavert, Ann (Environment, Black Mountain) <ann.stavert at csiro.au><mailto:ann.stavert at csiro.au>
Sent: Saturday, 20/4/2024 15:37 PDT -0700
Subject: Re: AGAGE69 freeze reminder and gccompare-nc improvements
One small correction.   Dickon just suggested changing "crds" to "optical" (which Ray has also mentioned).  I have just made this change, so please not that the dirlist is now:

/agage/summary/gccompare/ms
/agage/summary/gccompare/md
/agage/summary/gccompare/optical

These data will take a few hours to push everywhere.
Cheers, Peter

On Sat, Apr 20, 2024 at 3:25 PM Peter Salameh <psalameh at gcwerks.com<mailto:psalameh at gcwerks.com>> wrote:
Hi all,

Just a reminder that the freeze is for AGAGE69 is May 6.

There is an update of gccompare-nc, along with a changed directory structure, described below.  For those I can't push software to, please get the latest gcwerks-3 from hubibti.  I plan to obsolete the old gccompare and to stop making files for it soon.  Is anyone still using the old gccompare for *AGAGE* data?

The description below lists the main changes folks should be aware of now  (going forward I refer to gccompare-nc as just gccompare).  I am writing a document on the new gccompare and NetCDF structure, including for flask data which I hope to finish in the next few days.

1) The new gccompare files are now organized under /agage/summary/gccompare, with a subdirectory for each instrument, as shown below.

/agage/summary/gccompare/
     ms/   md/   crds/

I am pushing these out to the sites I have access to, but for those who get data from hubibti, please update your rsync script to get:

/agage/summary/gccompare
/agage/summary/gccompare_\*    (described next)

2) Historical gccompare data, from previous data freezes are saved in a similar structure, but with month and year appended.  gccompare now reads a config file named "snapshot" which allows selecting a snapshot directory from a menu, for example:

/agage/summary/gccompare_jun2023/ms
/agage/summary/gccompare_sep2023/ms

There are currently two of these saved directories, corresponding to AGAGE67 and 68, in the new NetCDF format.  I am working on converting old snapshots to this new format and will add them to the list soon.

3) gccompare now takes a -dirlist file (as gcwerks does), which allows selecting the gccompare directory from a list as shown below.  This reduces the number of launchers and clutter.  To use this new option, set the "Exec=" line in a gccompare launcher to:

Exec=/data/gcwerks-3/bin/gccompare-nc -dirlist /agage/dirlist-gccompare-nc

Here is an example dirlist file and the resulting gccompare selection window:

/agage/summary/gccompare/ms
/agage/summary/gccompare/md
/agage/summary/gccompare/crds

[image.png]

4) For those who create their own gccompare NetCDF files with gccompare-export-nc, there is a new -site_code option to export flask data.  With this option, the site code is appended to the gccompare instrument directory.  For example, for Melbourne flasks run at Aspendale, the data are exported with:

/agage/gcwerks-3/bin/gccompare-export-nc  /agage/aspendale-medusa  -exportdir /agage/summary/gccompare/ms  -site_code MEL

Which would result in the directory below.

/agage/summary/gccompare/ms/aspendale-medusa_MEL_flask/
    nf3_air.nc<https://gcc02.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense.com%2Fv3%2F__http%3A%2F%2Fnf3_air.nc__%3B!!Mih3wA!CWUlanN1XOz3y23RXeyWlb8b3td3TKwfaIm7L5eI3O_t2VKRZPCn5Haaqi-CP15RyUR8qGvJb9elrpItlw%24&data=05%7C02%7Cagage-sc%40espo.nasa.gov%7C75e5c4d3d9f5438d164c08dc6a3bfc9b%7C7005d45845be48ae8140d43da96dd17b%7C0%7C0%7C638502053073564224%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C0%7C%7C%7C&sdata=DGFNYOSGikTgZ%2FICuhNGqyeVObKJekClCCTsbCmE1CU%3D&reserved=0>  cf4_air.nc<https://gcc02.safelinks.protection.outlook.com/?url=https%3A%2F%2Furldefense.com%2Fv3%2F__http%3A%2F%2Fcf4_air.nc__%3B!!Mih3wA!CWUlanN1XOz3y23RXeyWlb8b3td3TKwfaIm7L5eI3O_t2VKRZPCn5Haaqi-CP15RyUR8qGvJb9dYZMrzxQ%24&data=05%7C02%7Cagage-sc%40espo.nasa.gov%7C75e5c4d3d9f5438d164c08dc6a3bfc9b%7C7005d45845be48ae8140d43da96dd17b%7C0%7C0%7C638502053073564224%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C0%7C%7C%7C&sdata=L8we5mMcPeI0JH9k3JhRIHhZ%2FsW1%2FS2DsT96PHMzSaM%3D&reserved=0> ...

This email is turning into the document, so I'd better stop.

Cheers, Peter

Dr. Jens Mühle   he/him/his  https://gcc02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fjmuhle.scrippsprofiles.ucsd.edu%2F&data=05%7C02%7Cagage-sc%40espo.nasa.gov%7C75e5c4d3d9f5438d164c08dc6a3bfc9b%7C7005d45845be48ae8140d43da96dd17b%7C0%7C0%7C638502053073564224%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C0%7C%7C%7C&sdata=EcmAp1QsYIKeOpWMnV9oizYYPnPXJH%2BDUisZlwtmsA0%3D&reserved=0
Advanced Global Atmospheric Gases Experiment (AGAGE)   agage.mit.edu
Tel: 858-534-2599          Fax: 858-455-8306         jmuhle at ucsd.edu<mailto:jmuhle at ucsd.edu>
Mail:  UCSD/SIO, 9500 Gilman Dr. #0244, La Jolla, CA 92093-0244, USA
Other: 7835 Trade St#100, 447 Vaughan Hall, San Diego, CA 92121, USA
Extreme weather is the new norm.  Will we prevent climate breakdown?

Dr. Jens Mühle   he/him/his  https://gcc02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fjmuhle.scrippsprofiles.ucsd.edu%2F&data=05%7C02%7Cagage-sc%40espo.nasa.gov%7C75e5c4d3d9f5438d164c08dc6a3bfc9b%7C7005d45845be48ae8140d43da96dd17b%7C0%7C0%7C638502053073564224%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C0%7C%7C%7C&sdata=EcmAp1QsYIKeOpWMnV9oizYYPnPXJH%2BDUisZlwtmsA0%3D&reserved=0
Advanced Global Atmospheric Gases Experiment (AGAGE)   agage.mit.edu
Tel: 858-534-2599          Fax: 858-455-8306         jmuhle at ucsd.edu<mailto:jmuhle at ucsd.edu>
Mail:  UCSD/SIO, 9500 Gilman Dr. #0244, La Jolla, CA 92093-0244, USA
Other: 7835 Trade St#100, 447 Vaughan Hall, San Diego, CA 92121, USA
Extreme weather is the new norm.  Will we prevent climate breakdown?
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